RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73530.2 View Network Show in Genome Browser |
| Other Names | Os01g0966100 |
| Description | ABC transporter, ATP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42601170-42612433 Nucleotide Length: 3978 |
| Protein-coding | LOC_Os01g73530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27630 LOC_Os01g27210 LOC_Os01g37910 LOC_Os01g04660 LOC_Os01g43844 LOC_Os01g27390 LOC_Os01g25100 LOC_Os01g55830 LOC_Os01g27360 LOC_Os01g27340 LOC_Os01g27260 More.. |
| Downstream Genes | LOC_Os02g44220 LOC_Os12g04990 LOC_Os05g01994 LOC_Os11g04980 LOC_Os04g55410 LOC_Os05g32630 LOC_Os06g22080 LOC_Os02g48350 LOC_Os05g47660 LOC_Os07g44140 LOC_Os07g44110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73530.2 |
| Rice Genome Annotation | LOC_Os01g73530.2 |
| Ricechip | LOC_Os01g73530.2 |
| KEGG | osa:4324471 dosa:Os01t0966100-01 |
| Entrez-Gene | 4324471 |