RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73540.1 View Network Show in Genome Browser |
| Other Names | Os01g0966200 |
| Description | YGGT family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42613763-42614641 Nucleotide Length: 594 |
| Protein-coding | LOC_Os01g73540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71990 LOC_Os01g35170 LOC_Os01g54390 |
| Downstream Genes | LOC_Os05g05740 LOC_Os04g58970 LOC_Os07g04160 LOC_Os04g54320 LOC_Os06g49160 LOC_Os07g19470 LOC_Os02g05890 LOC_Os06g12990 LOC_Os01g74190 LOC_Os07g34030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73540.1 |
| Rice Genome Annotation | LOC_Os01g73540.1 |
| Ricechip | LOC_Os01g73540.1 |
| KEGG | osa:4324472 dosa:Os01t0966200-01 |
| Entrez-Gene | 4324472 |