RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73550.2 View Network Show in Genome Browser |
| Other Names | Os01g0966300 |
| Description | mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42614788-42618386 Nucleotide Length: 1446 |
| Protein-coding | LOC_Os01g73550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51390 LOC_Os01g57073 LOC_Os01g72800 LOC_Os01g57082 LOC_Os01g34390 LOC_Os01g67860 |
| Downstream Genes | LOC_Os03g11410 LOC_Os08g10649 LOC_Os08g09350 LOC_Os02g24612 LOC_Os07g38270 LOC_Os07g38260 LOC_Os07g38280 LOC_Os02g52390 LOC_Os05g04940 LOC_Os12g04010 LOC_Os11g04200 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73550.2 |
| Rice Genome Annotation | LOC_Os01g73550.2 |
| Ricechip | LOC_Os01g73550.2 |
| KEGG | osa:4324473 dosa:Os01t0966300-01 |
| Entrez-Gene | 4324473 |