RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73760.1 View Network Show in Genome Browser |
| Other Names | Os01g0968700 |
| Description | IPP transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42723514-42726767 Nucleotide Length: 1389 |
| Protein-coding | LOC_Os01g73760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72880 LOC_Os01g14040 LOC_Os01g50760 LOC_Os01g73310 LOC_Os01g50050 LOC_Os01g61780 LOC_Os01g64630 LOC_Os01g71690 |
| Downstream Genes | LOC_Os11g38020 LOC_Os09g37930 LOC_Os02g37920 LOC_Os03g51790 LOC_Os06g37440 LOC_Os02g49980 LOC_Os05g46580 LOC_Os10g10500 LOC_Os03g26450 LOC_Os02g12794 LOC_Os02g12800 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00908 rn01100 rn01110 |
| Metacyc Pathways | PWY-2781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73760.1 |
| Rice Genome Annotation | LOC_Os01g73760.1 |
| Ricechip | LOC_Os01g73760.1 |
| KEGG | dosa:Os01t0968700-01 |
| Entrez-Gene | 4323831 |