RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73790.1 View Network Show in Genome Browser |
| Other Names | Os01g0969100 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42738667-42742174 Nucleotide Length: 1197 |
| Protein-coding | LOC_Os01g73790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g46170 LOC_Os02g47420 LOC_Os05g45930 LOC_Os08g13350 LOC_Os05g46550 LOC_Os03g60700 LOC_Os07g31840 LOC_Os02g53520 LOC_Os09g12600 LOC_Os02g45600 LOC_Os03g16010 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1854-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn01100 rn00500 |
| Metacyc Pathways | PWY-4821 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73790.1 |
| Rice Genome Annotation | LOC_Os01g73790.1 |
| Ricechip | LOC_Os01g73790.1 |
| KEGG | dosa:Os01t0969100-01 |
| Entrez-Gene | 4323835 |