RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73980.1 View Network Show in Genome Browser |
| Other Names | Os01g0971400 |
| Description | xylem cysteine proteinase 2 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42855657-42857466 Nucleotide Length: 1098 |
| Protein-coding | LOC_Os01g73980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11010 LOC_Os01g59150 LOC_Os01g68589 LOC_Os01g16030 LOC_Os01g55270 LOC_Os01g25500 LOC_Os01g37910 LOC_Os01g62490 |
| Downstream Genes | LOC_Os05g24550 LOC_Os05g01810 LOC_Os07g01370 LOC_Os05g41990 LOC_Os03g18454 LOC_Os07g45060 LOC_Os04g38310 LOC_Os05g04820 LOC_Os06g43620 LOC_Os07g44350 LOC_Os03g12250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73980.1 |
| Rice Genome Annotation | LOC_Os01g73980.1 |
| Ricechip | LOC_Os01g73980.1 |
| KEGG | dosa:Os01t0971400-01 |
| Entrez-Gene | 4323845 |