RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g74000.1 View Network Show in Genome Browser |
| Other Names | Os01g0971600 |
| Description | glycerol-3-phosphate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42860708-42866652 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os01g74000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09460 LOC_Os01g42850 LOC_Os01g53930 LOC_Os01g52450 LOC_Os01g62870 LOC_Os01g62860 LOC_Os01g39270 LOC_Os01g71990 LOC_Os01g62880 LOC_Os01g16900 LOC_Os01g53910 More.. |
| Downstream Genes | LOC_Os09g10820 LOC_Os10g11140 LOC_Os06g50050 LOC_Os05g09500 LOC_Os09g38030 LOC_Os04g48820 LOC_Os08g25590 LOC_Os07g26700 LOC_Os02g36960 LOC_Os05g44340 LOC_Os05g45590 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g74000.1 |
| Rice Genome Annotation | LOC_Os01g74000.1 |
| Ricechip | LOC_Os01g74000.1 |
| KEGG | dosa:Os01t0971600-01 |
| Entrez-Gene | 4323847 |