RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g74030.1 View Network Show in Genome Browser |
| Other Names | Os01g0971900 |
| Description | pumilio-family RNA binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42876539-42882964 Nucleotide Length: 2685 |
| Protein-coding | LOC_Os01g74030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16110 LOC_Os01g39250 LOC_Os01g39260 |
| Downstream Genes | LOC_Os10g25110 LOC_Os04g52960 LOC_Os07g10350 LOC_Os09g02810 LOC_Os02g53420 LOC_Os12g27090 LOC_Os03g57430 LOC_Os04g58180 LOC_Os06g43690 LOC_Os12g07300 LOC_Os03g02260 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167d-5p osa-miR167e-5p osa-miR167f osa-miR167g osa-miR167h-5p osa-miR167i-5p osa-miR167j
|
| Database Links | |
|---|---|
| Gramene | LOC_Os01g74030.1 |
| Rice Genome Annotation | LOC_Os01g74030.1 |
| Ricechip | LOC_Os01g74030.1 |
| KEGG | osa:4326392 dosa:Os01t0971900-01 |
| Entrez-Gene | 4326392 |