RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g74190.1 View Network Show in Genome Browser |
| Other Names | Os01g0973400 |
| Description | radical SAM enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42977145-42979816 Nucleotide Length: 1194 |
| Protein-coding | LOC_Os01g74190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56310 LOC_Os01g01740 LOC_Os01g06240 LOC_Os01g73540 LOC_Os01g70970 LOC_Os01g54350 LOC_Os01g02610 LOC_Os01g09860 LOC_Os01g70410 LOC_Os01g47810 LOC_Os01g59360 More.. |
| Downstream Genes | LOC_Os02g35700 LOC_Os12g36194 LOC_Os05g51700 LOC_Os04g40840 LOC_Os03g56390 LOC_Os04g38330 LOC_Os04g35480 LOC_Os07g30970 LOC_Os12g17070 LOC_Os11g38030 LOC_Os08g42730 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00380 rn00624 rn01120 rn00340 rn00350 rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g74190.1 |
| Rice Genome Annotation | LOC_Os01g74190.1 |
| Ricechip | LOC_Os01g74190.1 |
| KEGG | osa:4326401 dosa:Os01t0973400-01 |
| Entrez-Gene | 4326401 |