RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g74580.1 View Network Show in Genome Browser |
| Other Names | Os01g0977200 |
| Description | dnaJ homolog subfamily C member, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 43189156-43193534 Nucleotide Length: 1416 |
| Protein-coding | LOC_Os01g74580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08560 LOC_Os01g49430 LOC_Os01g62290 LOC_Os01g33360 LOC_Os01g13760 LOC_Os01g43030 LOC_Os01g32184 |
| Downstream Genes | LOC_Os05g08840 LOC_Os02g02410 LOC_Os12g05760 LOC_Os02g48110 LOC_Os03g16920 LOC_Os06g46600 LOC_Os09g31486 LOC_Os11g08470 LOC_Os05g30480 LOC_Os03g16880 LOC_Os03g50250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g74580.1 |
| Rice Genome Annotation | LOC_Os01g74580.1 |
| Ricechip | LOC_Os01g74580.1 |
| KEGG | osa:4327812 dosa:Os01t0977200-00 |
| Entrez-Gene | 4327812 |