RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g74650.1 View Network Show in Genome Browser
Other Names	Os01g0978100
Description	cysteine synthase, mitochondrial precursor, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 43231935-43238015 Nucleotide Length: 1239
Protein-coding	LOC_Os01g74650

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009856	pollination	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005739	mitochondrion	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g40860 LOC_Os01g46980 LOC_Os01g37837 LOC_Os01g53900 LOC_Os01g55820 LOC_Os01g12260 LOC_Os01g59150 LOC_Os01g18050 LOC_Os01g68324 LOC_Os01g51380 LOC_Os01g01302 More..
Downstream Genes	LOC_Os02g08180 LOC_Os07g08430 LOC_Os08g04180 LOC_Os04g46930 LOC_Os06g07960 LOC_Os06g07860 LOC_Os11g37920 LOC_Os06g42560 LOC_Os03g50880 LOC_Os03g50510 LOC_Os05g47640 More..

Pathways
KEGG Pathways	rn00270 rn00920 rn01100 rn01120
Metacyc Pathways	CYSTSYN-PWY

Database Links
Gramene	LOC_Os01g74650.1
Rice Genome Annotation	LOC_Os01g74650.1
Ricechip	LOC_Os01g74650.1
KEGG	osa:4327819 dosa:Os01t0978100-01
Entrez-Gene	4327819