RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g74650.2 View Network Show in Genome Browser |
| Other Names | Os01g0978100 |
| Description | cysteine synthase, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 43231935-43238015 Nucleotide Length: 1188 |
| Protein-coding | LOC_Os01g74650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40860 LOC_Os01g46980 LOC_Os01g37837 LOC_Os01g53900 LOC_Os01g55820 LOC_Os01g12260 LOC_Os01g59150 LOC_Os01g18050 LOC_Os01g68324 LOC_Os01g51380 LOC_Os01g01302 More.. |
| Downstream Genes | LOC_Os02g08180 LOC_Os07g08430 LOC_Os08g04180 LOC_Os04g46930 LOC_Os06g07960 LOC_Os06g07860 LOC_Os11g37920 LOC_Os06g42560 LOC_Os03g50880 LOC_Os03g50510 LOC_Os05g47640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g74650.2 |
| Rice Genome Annotation | LOC_Os01g74650.2 |
| Ricechip | LOC_Os01g74650.2 |
| KEGG | osa:4327819 dosa:Os01t0978100-01 |
| Entrez-Gene | 4327819 |