RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01030.2 View Network Show in Genome Browser |
| Other Names | Os02g0100300 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 14061-16803 Nucleotide Length: 1227 |
| Protein-coding | LOC_Os02g01030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40660 LOC_Os01g68680 LOC_Os01g43030 LOC_Os01g32184 LOC_Os01g49150 LOC_Os01g68324 LOC_Os01g64640 LOC_Os01g38510 LOC_Os01g34614 |
| Downstream Genes | LOC_Os09g30412 LOC_Os09g30418 LOC_Os08g39140 LOC_Os03g01910 LOC_Os07g12110 LOC_Os05g44360 LOC_Os04g01740 LOC_Os08g09940 LOC_Os07g10830 LOC_Os02g08300 LOC_Os06g41750 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR397b |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01030.2 |
| Rice Genome Annotation | LOC_Os02g01030.2 |
| Ricechip | LOC_Os02g01030.2 |
| KEGG | osa:4327973 dosa:Os02t0100300-01 |
| Entrez-Gene | 4327973 |