RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01160.1 View Network Show in Genome Browser |
| Other Names | Os02g0101600 |
| Description | skp1 family, tetramerisation domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 85332-85637 Nucleotide Length: 306 |
| Protein-coding | LOC_Os02g01160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48420 |
| Downstream Genes | LOC_Os03g50290 LOC_Os12g07140 LOC_Os02g44100 LOC_Os08g33370 LOC_Os03g17690 LOC_Os03g22810 LOC_Os05g02260 LOC_Os06g51220 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01160.1 |
| Rice Genome Annotation | LOC_Os02g01160.1 |
| Ricechip | LOC_Os02g01160.1 |
| KEGG | osa:4327982 dosa:Os02t0101600-00 |
| Entrez-Gene | 4327982 |