RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01440.1 View Network Show in Genome Browser |
| Other Names | Os02g0104700 |
| Description | nitric oxide synthase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 261348-265491 Nucleotide Length: 1644 |
| Protein-coding | LOC_Os02g01440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67134 LOC_Os01g64490 LOC_Os01g27730 LOC_Os01g59990 LOC_Os01g10820 LOC_Os01g22490 LOC_Os01g61814 LOC_Os01g04910 LOC_Os01g50360 LOC_Os01g70010 |
| Downstream Genes | LOC_Os04g50990 LOC_Os02g47140 LOC_Os05g49150 LOC_Os07g10660 LOC_Os04g53220 LOC_Os03g08450 LOC_Os11g05562 LOC_Os08g44480 LOC_Os03g59310 LOC_Os09g39540 LOC_Os05g51700 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn01100 rn01110 |
| Metacyc Pathways | PWY-4983 |
| Reference | |
|---|---|
| PubMed | 21625436 20456051 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01440.1 |
| Rice Genome Annotation | LOC_Os02g01440.1 |
| Ricechip | LOC_Os02g01440.1 |
| KEGG | osa:4328006 dosa:Os02t0104700-02 |
| Entrez-Gene | 4328006 |