RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01760.1 View Network Show in Genome Browser |
| Other Names | Os02g0107200 |
| Description | diphosphomevalonate decarboxylase family protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 422694-424850 Nucleotide Length: 720 |
| Protein-coding | LOC_Os02g01760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11300 LOC_Os01g70960 LOC_Os01g11340 LOC_Os01g11270 LOC_Os01g18860 LOC_Os01g11280 LOC_Os01g43540 LOC_Os01g22010 LOC_Os01g66180 |
| Downstream Genes | LOC_Os02g32490 LOC_Os05g34770 LOC_Os10g18220 LOC_Os02g04710 LOC_Os09g07830 LOC_Os08g43170 LOC_Os03g12900 LOC_Os07g10600 LOC_Os03g29170 LOC_Os04g33190 LOC_Os05g23620 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00900 rn01100 rn01110 |
| Metacyc Pathways | PWY-922 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01760.1 |
| Rice Genome Annotation | LOC_Os02g01760.1 |
| Ricechip | LOC_Os02g01760.1 |
| KEGG | osa:4328025 dosa:Os02t0107200-01 |
| Entrez-Gene | 4328025 |