RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g01960.1 View Network Show in Genome Browser |
| Other Names | Os02g0109800 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 534930-538203 Nucleotide Length: 1800 |
| Protein-coding | LOC_Os02g01960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43030 |
| Downstream Genes | LOC_Os12g41400 LOC_Os12g07740 LOC_Os05g11550 LOC_Os08g05830 LOC_Os03g64110 LOC_Os08g13690 LOC_Os04g56070 LOC_Os04g51630 LOC_Os08g28190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g01960.1 |
| Rice Genome Annotation | LOC_Os02g01960.1 |
| Ricechip | LOC_Os02g01960.1 |
| KEGG | osa:4328037 dosa:Os02t0109800-01 |
| Entrez-Gene | 4328037 |