RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02390.1 View Network Show in Genome Browser |
| Other Names | Os02g0115600 |
| Description | S1 RNA binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 818981-824546 Nucleotide Length: 2400 |
| Protein-coding | LOC_Os02g02390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03660 LOC_Os01g69950 LOC_Os01g40310 LOC_Os01g72800 LOC_Os01g22520 LOC_Os01g58470 LOC_Os01g45070 LOC_Os01g32730 LOC_Os01g53150 |
| Downstream Genes | LOC_Os04g43922 LOC_Os11g41910 LOC_Os03g52640 LOC_Os05g35540 LOC_Os09g24670 LOC_Os02g19860 LOC_Os05g41510 LOC_Os05g33240 LOC_Os07g07310 LOC_Os03g18510 LOC_Os08g44290 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn00710 rn01100 rn01120 |
| Metacyc Pathways | ANAEROFRUCAT-PWY P185-PWY GLUCONEO-PWY PWY-1042 CALVIN-PWY PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02390.1 |
| Rice Genome Annotation | LOC_Os02g02390.1 |
| Ricechip | LOC_Os02g02390.1 |
| KEGG | osa:4328072 dosa:Os02t0115600-01 |
| Entrez-Gene | 4328072 |