RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02400.3 View Network Show in Genome Browser |
| Other Names | Os02g0115700 |
| Description | catalase isozyme A, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 824850-827644 Nucleotide Length: 855 |
| Protein-coding | LOC_Os02g02400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48300 LOC_Os01g16146 LOC_Os01g01689 LOC_Os01g68940 LOC_Os01g68950 LOC_Os01g22490 LOC_Os01g14950 LOC_Os01g24060 |
| Downstream Genes | LOC_Os08g44240 LOC_Os06g01390 LOC_Os05g25850 LOC_Os03g03910 LOC_Os03g17140 LOC_Os06g51150 LOC_Os07g46990 LOC_Os03g22810 LOC_Os03g31550 LOC_Os04g30760 LOC_Os02g56980 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02400.3 |
| Rice Genome Annotation | LOC_Os02g02400.3 |
| Ricechip | LOC_Os02g02400.3 |
| KEGG | osa:4328073 dosa:Os02t0115700-01 |
| Entrez-Gene | 4328073 |