RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02424.1 View Network Show in Genome Browser |
| Other Names | Os02g0116000 |
| Description | ZOS2-02 - C2H2 zinc finger protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 853767-859880 Nucleotide Length: 1140 |
| Protein-coding | LOC_Os02g02424 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16220 LOC_Os01g59150 LOC_Os01g18050 LOC_Os01g55200 LOC_Os01g41630 LOC_Os01g45990 LOC_Os01g11250 LOC_Os01g52070 LOC_Os01g55549 |
| Downstream Genes | LOC_Os02g17970 LOC_Os03g12860 LOC_Os08g32080 LOC_Os06g05800 LOC_Os06g04870 LOC_Os07g31340 LOC_Os10g01470 LOC_Os08g36220 LOC_Os09g27450 LOC_Os10g41230 LOC_Os04g46350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02424.1 |
| Rice Genome Annotation | LOC_Os02g02424.1 |
| Ricechip | LOC_Os02g02424.1 |
| KEGG | osa:4328076 dosa:Os02t0116000-01 |
| Entrez-Gene | 4328076 |