RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02510.1 View Network Show in Genome Browser |
| Other Names | Os02g0116900 |
| Description | DNA-directed RNA polymerase II subunit RPB4, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 894656-895733 Nucleotide Length: 429 |
| Protein-coding | LOC_Os02g02510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59140 LOC_Os01g56550 LOC_Os01g23630 LOC_Os02g01250 LOC_Os01g34614 LOC_Os01g08970 LOC_Os01g36570 LOC_Os01g72890 LOC_Os01g48810 LOC_Os02g01740 LOC_Os01g63940 More.. |
| Downstream Genes | LOC_Os09g02284 LOC_Os03g01230 LOC_Os05g05860 LOC_Os05g33240 LOC_Os12g37370 LOC_Os07g07610 LOC_Os03g44484 LOC_Os02g53230 LOC_Os07g43060 LOC_Os07g27930 LOC_Os10g10990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02510.1 |
| Rice Genome Annotation | LOC_Os02g02510.1 |
| Ricechip | LOC_Os02g02510.1 |
| KEGG | osa:4328083 dosa:Os02t0116900-01 |
| Entrez-Gene | 4328083 |