RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02530.1 View Network Show in Genome Browser |
| Other Names | Os02g0117400 |
| Description | signal peptide peptidase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 906564-911664 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os02g02530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12800 LOC_Os02g01010 LOC_Os02g02410 LOC_Os01g36890 LOC_Os01g36920 LOC_Os01g38510 LOC_Os01g68324 LOC_Os01g48990 LOC_Os01g73310 LOC_Os01g61920 LOC_Os01g23740 More.. |
| Downstream Genes | LOC_Os07g06590 LOC_Os04g51610 LOC_Os09g07510 LOC_Os10g37630 LOC_Os03g57420 LOC_Os11g09280 LOC_Os09g17840 LOC_Os09g17830 LOC_Os03g11440 LOC_Os08g43640 LOC_Os05g23600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02530.1 |
| Rice Genome Annotation | LOC_Os02g02530.1 |
| Ricechip | LOC_Os02g02530.1 |
| KEGG | osa:4328088 dosa:Os02t0117400-01 |
| Entrez-Gene | 4328088 |