RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02540.1 View Network Show in Genome Browser |
| Other Names | Os02g0117500 |
| Description | glutamate receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 918797-923970 Nucleotide Length: 2835 |
| Protein-coding | LOC_Os02g02540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0009606 | tropism | Biological Process | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72870 LOC_Os02g02410 |
| Downstream Genes | LOC_Os12g03720 LOC_Os11g03900 LOC_Os05g45420 LOC_Os04g49570 LOC_Os04g32950 LOC_Os08g37800 LOC_Os03g17980 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02540.1 |
| Rice Genome Annotation | LOC_Os02g02540.1 |
| Ricechip | LOC_Os02g02540.1 |
| KEGG | osa:4328089 dosa:Os02t0117500-01 |
| Entrez-Gene | 4328089 |