RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g02860.1 View Network Show in Genome Browser
Other Names	Os02g0121000
Description	glutamyl-tRNA synthetase, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 1090312-1095993 Nucleotide Length: 1704
Protein-coding	LOC_Os02g02860

Gene Ontology Classification
GO	Name	Type	Code
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005739	mitochondrion	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g54020 LOC_Os01g31610 LOC_Os01g56350 LOC_Os01g55820 LOC_Os01g06510 LOC_Os01g16190 LOC_Os01g32800 LOC_Os01g39630
Downstream Genes	LOC_Os02g53770 LOC_Os11g02450 LOC_Os09g36710 LOC_Os08g43540 LOC_Os03g48850 LOC_Os09g32650 LOC_Os06g31210 LOC_Os09g34010 LOC_Os08g40430 LOC_Os06g04530 LOC_Os11g34210 More..

miRNA Regulations
miRNAs	osa-miR1863a

Pathways
KEGG Pathways	rn00860 rn00970 rn01100 rn01110
Metacyc Pathways	TRNA-CHARGING-PWY PWY-5188

Reference
PubMed	17541632

Database Links
Gramene	LOC_Os02g02860.1
Rice Genome Annotation	LOC_Os02g02860.1
Ricechip	LOC_Os02g02860.1
KEGG	osa:4328118 dosa:Os02t0121000-01
Entrez-Gene	4328118