RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02890.1 View Network Show in Genome Browser |
| Other Names | Os02g0121300 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1116059-1117136 Nucleotide Length: 519 |
| Protein-coding | LOC_Os02g02890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46980 LOC_Os01g62230 LOC_Os01g12580 LOC_Os01g48300 LOC_Os01g12260 LOC_Os01g53680 LOC_Os01g16240 LOC_Os01g17190 LOC_Os01g05900 LOC_Os01g05630 LOC_Os01g05610 More.. |
| Downstream Genes | LOC_Os07g22220 LOC_Os02g38920 LOC_Os10g43040 LOC_Os04g40950 LOC_Os03g46770 LOC_Os02g06640 LOC_Os08g03290 LOC_Os12g43600 LOC_Os11g47809 LOC_Os03g08050 LOC_Os03g08020 More.. |
| Reference | |
|---|---|
| PubMed | 19214808 23289750 21324151 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02890.1 |
| Rice Genome Annotation | LOC_Os02g02890.1 |
| Ricechip | LOC_Os02g02890.1 |
| KEGG | osa:4328121 dosa:Os02t0121300-01 |
| Entrez-Gene | 4328121 |