RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g02980.1 View Network Show in Genome Browser |
| Other Names | Os02g0122200 |
| Description | MATE domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1166107-1173549 Nucleotide Length: 1599 |
| Protein-coding | LOC_Os02g02980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09620 |
| Downstream Genes | LOC_Os03g36630 LOC_Os04g56740 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b osa-miR1439 osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g02980.1 |
| Rice Genome Annotation | LOC_Os02g02980.1 |
| Ricechip | LOC_Os02g02980.1 |
| KEGG | osa:4328128 dosa:Os02t0122200-00 |
| Entrez-Gene | 4328128 |