RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03030.1 View Network Show in Genome Browser |
| Other Names | Os02g0122700 |
| Description | ATXR, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1190846-1192461 Nucleotide Length: 1086 |
| Protein-coding | LOC_Os02g03030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11952 LOC_Os01g65600 LOC_Os01g66420 LOC_Os01g74500 |
| Downstream Genes | LOC_Os02g39800 LOC_Os11g14010 LOC_Os07g41740 LOC_Os07g12910 LOC_Os07g07690 LOC_Os04g14510 LOC_Os03g53700 LOC_Os03g50780 LOC_Os02g52960 LOC_Os09g04890 LOC_Os12g41900 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03030.1 |
| Rice Genome Annotation | LOC_Os02g03030.1 |
| Ricechip | LOC_Os02g03030.1 |
| KEGG | dosa:Os02t0122700-00 |