RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03040.1 View Network Show in Genome Browser |
| Other Names | Os02g0122800 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1193366-1197056 Nucleotide Length: 840 |
| Protein-coding | LOC_Os02g03040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72834 LOC_Os01g72890 LOC_Os01g16090 LOC_Os01g68524 LOC_Os01g74340 LOC_Os01g68790 LOC_Os01g65550 |
| Downstream Genes | LOC_Os10g30370 LOC_Os09g03610 LOC_Os03g07800 LOC_Os03g05830 LOC_Os07g41120 LOC_Os07g03240 LOC_Os05g01540 LOC_Os03g03140 LOC_Os02g11750 LOC_Os04g49440 LOC_Os04g52200 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03040.1 |
| Rice Genome Annotation | LOC_Os02g03040.1 |
| Ricechip | LOC_Os02g03040.1 |
| KEGG | osa:4328133 dosa:Os02t0122800-02 |
| Entrez-Gene | 4328133 |