RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03050.1 View Network Show in Genome Browser |
| Other Names | Os02g0122900 |
| Description | dimethyladenosine transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1198096-1202330 Nucleotide Length: 636 |
| Protein-coding | LOC_Os02g03050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58790 LOC_Os01g60660 LOC_Os01g24750 |
| Downstream Genes | LOC_Os04g48820 LOC_Os11g16390 LOC_Os05g07860 LOC_Os07g06410 LOC_Os07g06440 LOC_Os06g06880 LOC_Os03g16110 LOC_Os03g11120 LOC_Os02g57450 LOC_Os08g35440 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03050.1 |
| Rice Genome Annotation | LOC_Os02g03050.1 |
| Ricechip | LOC_Os02g03050.1 |
| KEGG | osa:9271200 dosa:Os02t0122900-01 |
| Entrez-Gene | 9271200 |