RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03110.2 View Network Show in Genome Browser |
| Other Names | Os02g0123600 |
| Description | CDP-alcohol phosphatidyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1231020-1234484 Nucleotide Length: 672 |
| Protein-coding | LOC_Os02g03110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g57930 LOC_Os02g02750 LOC_Os01g59790 LOC_Os01g16030 |
| Downstream Genes | LOC_Os03g17520 LOC_Os06g10280 LOC_Os07g07220 LOC_Os05g41060 LOC_Os03g59740 LOC_Os04g36810 LOC_Os07g12200 LOC_Os07g12170 LOC_Os04g59560 LOC_Os02g31150 LOC_Os03g17020 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1875 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03110.2 |
| Rice Genome Annotation | LOC_Os02g03110.2 |
| Ricechip | LOC_Os02g03110.2 |
| KEGG | osa:4328140 dosa:Os02t0123600-01 |
| Entrez-Gene | 4328140 |