RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g03260.1 View Network Show in Genome Browser
Other Names	Os02g0125100
Description	3-isopropylmalate dehydratase large subunit 2, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 1304820-1309781 Nucleotide Length: 1545
Protein-coding	LOC_Os02g03260

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0019748	secondary metabolic process	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g46380 LOC_Os01g54370 LOC_Os01g66500 LOC_Os01g68950 LOC_Os01g68940 LOC_Os01g38670 LOC_Os01g71990 LOC_Os01g38680 LOC_Os01g37760 LOC_Os01g51170 LOC_Os01g32080 More..
Downstream Genes	LOC_Os02g43830 LOC_Os03g45320 LOC_Os12g04440 LOC_Os11g04670 LOC_Os05g49800 LOC_Os05g01440 LOC_Os02g30630 LOC_Os09g07830 LOC_Os11g14950 LOC_Os02g39570 LOC_Os03g11120 More..

Pathways
KEGG Pathways	rn00290 rn00660 rn01100 rn01210 rn00020 rn00630 rn00720 rn01110 rn01120
Metacyc Pathways	TCA ANARESP1-PWY P23-PWY P105-PWY LYSINE-AMINOAD-PWY LEUSYN-PWY

Database Links
Gramene	LOC_Os02g03260.1
Rice Genome Annotation	LOC_Os02g03260.1
Ricechip	LOC_Os02g03260.1
KEGG	osa:4328147 dosa:Os02t0125100-01
Entrez-Gene	4328147