RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03340.4 View Network Show in Genome Browser |
| Other Names | Os02g0125800 |
| Description | RNA polymerase II transcription factor B subunit 4, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1347155-1351335 Nucleotide Length: 870 |
| Protein-coding | LOC_Os02g03340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49680 LOC_Os01g08970 LOC_Os02g02510 LOC_Os01g59140 LOC_Os01g34614 LOC_Os01g32750 LOC_Os01g63940 LOC_Os01g56550 LOC_Os01g48810 LOC_Os01g04870 LOC_Os01g73890 More.. |
| Downstream Genes | LOC_Os08g25060 LOC_Os04g42990 LOC_Os05g05260 LOC_Os03g52750 LOC_Os04g58350 LOC_Os05g32600 LOC_Os09g36440 LOC_Os12g39070 LOC_Os10g10990 LOC_Os03g57870 LOC_Os02g53500 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03340.4 |
| Rice Genome Annotation | LOC_Os02g03340.4 |
| Ricechip | LOC_Os02g03340.4 |
| KEGG | osa:4328152 dosa:Os02t0125800-01 |
| Entrez-Gene | 4328152 |