RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03450.1 View Network Show in Genome Browser |
| Other Names | Os02g0126800 |
| Description | vesicle transport v-SNARE protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1402571-1404566 Nucleotide Length: 744 |
| Protein-coding | LOC_Os02g03450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51120 LOC_Os01g37980 LOC_Os01g64650 LOC_Os01g73300 LOC_Os01g13350 LOC_Os01g59790 LOC_Os01g16030 LOC_Os01g32880 LOC_Os01g56590 LOC_Os01g55820 |
| Downstream Genes | LOC_Os03g45260 LOC_Os08g18110 LOC_Os03g42320 LOC_Os08g34970 LOC_Os06g09850 LOC_Os03g57760 LOC_Os03g50300 LOC_Os05g44310 LOC_Os12g35360 LOC_Os07g31370 LOC_Os03g09140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03450.1 |
| Rice Genome Annotation | LOC_Os02g03450.1 |
| Ricechip | LOC_Os02g03450.1 |
| KEGG | osa:4328159 dosa:Os02t0126800-01 |
| Entrez-Gene | 4328159 |