RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g03750.1 View Network Show in Genome Browser |
| Other Names | Os02g0130200 |
| Description | polygalacturonase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1570082-1574900 Nucleotide Length: 1527 |
| Protein-coding | LOC_Os02g03750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68950 LOC_Os01g68940 |
| Downstream Genes | LOC_Os05g46560 LOC_Os08g33082 LOC_Os03g25440 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR3980a-3p osa-miR3980b-3p osa-miR1439 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g03750.1 |
| Rice Genome Annotation | LOC_Os02g03750.1 |
| Ricechip | LOC_Os02g03750.1 |
| KEGG | osa:4328189 dosa:Os02t0130200-01 |
| Entrez-Gene | 4328189 |