RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04040.1 View Network Show in Genome Browser |
| Other Names | Os02g0133300 |
| Description | RecF/RecN/SMC N terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1754546-1757790 Nucleotide Length: 1485 |
| Protein-coding | LOC_Os02g04040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72800 LOC_Os01g68120 LOC_Os01g56600 LOC_Os01g59510 LOC_Os02g01740 LOC_Os01g02460 LOC_Os01g02780 LOC_Os01g02690 LOC_Os01g20900 LOC_Os01g02410 LOC_Os01g54350 More.. |
| Downstream Genes | LOC_Os02g04050 LOC_Os03g02970 LOC_Os09g14610 LOC_Os06g25250 LOC_Os08g40830 LOC_Os03g38740 LOC_Os04g43050 LOC_Os11g05556 LOC_Os05g18850 LOC_Os02g15220 LOC_Os12g44390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04040.1 |
| Rice Genome Annotation | LOC_Os02g04040.1 |
| Ricechip | LOC_Os02g04040.1 |
| KEGG | osa:4328210 dosa:Os02t0133300-01 |
| Entrez-Gene | 4328210 |