RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04080.1 View Network Show in Genome Browser |
| Other Names | Os02g0133400 |
| Description | chromosome segregation protein sudA, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1772752-1779320 Nucleotide Length: 2658 |
| Protein-coding | LOC_Os02g04080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67250 LOC_Os01g72800 LOC_Os01g13470 LOC_Os01g68120 LOC_Os01g67740 LOC_Os01g59510 LOC_Os01g56600 LOC_Os01g54870 LOC_Os01g02460 LOC_Os01g47660 LOC_Os01g55360 More.. |
| Downstream Genes | LOC_Os12g44390 LOC_Os03g02970 LOC_Os05g09620 LOC_Os09g14610 LOC_Os04g43050 LOC_Os06g25250 LOC_Os03g38740 LOC_Os10g34430 LOC_Os05g18850 LOC_Os02g58020 LOC_Os10g34750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04080.1 |
| Rice Genome Annotation | LOC_Os02g04080.1 |
| Ricechip | LOC_Os02g04080.1 |
| KEGG | osa:9269307 dosa:Os02t0133400-00 |
| Entrez-Gene | 9269307 |