RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04100.1 View Network Show in Genome Browser |
| Other Names | Os02g0133800 |
| Description | peptidase, T1 family, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1784550-1788087 Nucleotide Length: 813 |
| Protein-coding | LOC_Os02g04100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16190 LOC_Os01g32800 LOC_Os01g59600 LOC_Os01g16670 LOC_Os01g63710 LOC_Os02g03060 LOC_Os01g16650 LOC_Os01g70140 LOC_Os01g46926 LOC_Os01g66730 LOC_Os01g47256 More.. |
| Downstream Genes | LOC_Os08g41730 LOC_Os09g32800 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os05g30800 LOC_Os03g08280 LOC_Os02g11050 LOC_Os11g40140 LOC_Os02g42320 LOC_Os03g26970 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846e |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04100.1 |
| Rice Genome Annotation | LOC_Os02g04100.1 |
| Ricechip | LOC_Os02g04100.1 |
| KEGG | osa:4328215 dosa:Os02t0133800-01 |
| Entrez-Gene | 4328215 |