RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04160.2 View Network Show in Genome Browser |
| Other Names | Os02g0134300 |
| Description | transcription elongation factor 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1817721-1818221 Nucleotide Length: 234 |
| Protein-coding | LOC_Os02g04160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37800 LOC_Os01g10820 LOC_Os02g02510 LOC_Os01g34614 LOC_Os01g60790 LOC_Os01g08450 LOC_Os01g17330 |
| Downstream Genes | LOC_Os07g02350 LOC_Os03g10940 LOC_Os08g41250 LOC_Os03g55490 LOC_Os02g38300 LOC_Os07g29320 LOC_Os02g37050 LOC_Os07g44620 LOC_Os02g14059 LOC_Os06g35730 LOC_Os05g11710 More.. |
| Reference | |
|---|---|
| PubMed | 22367482 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04160.2 |
| Rice Genome Annotation | LOC_Os02g04160.2 |
| Ricechip | LOC_Os02g04160.2 |
| KEGG | osa:4328219 dosa:Os02t0134300-01 |
| Entrez-Gene | 4328219 |