RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04270.1 View Network Show in Genome Browser |
| Other Names | Os02g0135700 |
| Description | DNA polymerase V, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1882715-1888956 Nucleotide Length: 3918 |
| Protein-coding | LOC_Os02g04270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01350 LOC_Os01g40110 LOC_Os01g63680 |
| Downstream Genes | LOC_Os03g51900 LOC_Os06g30320 LOC_Os09g29630 LOC_Os04g36890 LOC_Os02g56130 LOC_Os07g14110 LOC_Os07g16950 LOC_Os11g01420 LOC_Os07g12130 LOC_Os07g46660 LOC_Os12g06910 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 rn00230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04270.1 |
| Rice Genome Annotation | LOC_Os02g04270.1 |
| Ricechip | LOC_Os02g04270.1 |
| KEGG | osa:4328227 dosa:Os02t0135700-01 |
| Entrez-Gene | 4328227 |