RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04320.1 View Network Show in Genome Browser |
| Other Names | Os02g0135800 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1902990-1905136 Nucleotide Length: 918 |
| Protein-coding | LOC_Os02g04320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g23620 LOC_Os01g34200 LOC_Os01g51120 LOC_Os01g37980 LOC_Os01g67134 LOC_Os01g62290 LOC_Os01g49290 LOC_Os01g07810 LOC_Os01g48770 LOC_Os01g55820 LOC_Os01g63890 More.. |
| Downstream Genes | LOC_Os03g07580 LOC_Os07g46370 LOC_Os11g24560 LOC_Os11g42420 LOC_Os04g04020 LOC_Os12g37360 LOC_Os04g56160 LOC_Os06g12090 LOC_Os12g44150 LOC_Os08g36994 LOC_Os07g09340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04320.1 |
| Rice Genome Annotation | LOC_Os02g04320.1 |
| Ricechip | LOC_Os02g04320.1 |
| KEGG | osa:4328228 dosa:Os02t0135800-01 |
| Entrez-Gene | 4328228 |