RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04460.1 View Network Show in Genome Browser |
| Other Names | Os02g0137200 |
| Description | ribosomal protein L3, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1972935-1974663 Nucleotide Length: 816 |
| Protein-coding | LOC_Os02g04460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42980 LOC_Os01g15290 LOC_Os01g61814 LOC_Os02g01230 LOC_Os01g62210 LOC_Os01g10820 LOC_Os01g42640 LOC_Os01g54540 LOC_Os01g59060 LOC_Os01g47330 LOC_Os01g48690 More.. |
| Downstream Genes | LOC_Os03g10060 LOC_Os03g15870 LOC_Os02g51790 LOC_Os03g24020 LOC_Os06g46930 LOC_Os03g58430 LOC_Os07g08660 LOC_Os07g23244 LOC_Os04g45490 LOC_Os11g37510 LOC_Os12g38000 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04460.1 |
| Rice Genome Annotation | LOC_Os02g04460.1 |
| Ricechip | LOC_Os02g04460.1 |
| KEGG | osa:4328236 dosa:Os02t0137200-01 |
| Entrez-Gene | 4328236 |