RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04480.1 View Network Show in Genome Browser |
| Other Names | Os02g0137400 |
| Description | cleavage and polyadenylation specificity factor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 1979693-1983630 Nucleotide Length: 2538 |
| Protein-coding | LOC_Os02g04480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01250 LOC_Os02g01740 LOC_Os01g15860 LOC_Os01g72890 LOC_Os02g03440 LOC_Os02g02510 LOC_Os01g34614 LOC_Os01g43170 LOC_Os01g36570 LOC_Os01g63890 LOC_Os01g15310 More.. |
| Downstream Genes | LOC_Os02g05310 LOC_Os02g58090 LOC_Os02g14780 LOC_Os10g31900 LOC_Os03g50850 LOC_Os03g15700 LOC_Os02g13990 LOC_Os08g01840 LOC_Os03g13760 LOC_Os04g18010 LOC_Os02g05410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04480.1 |
| Rice Genome Annotation | LOC_Os02g04480.1 |
| Ricechip | LOC_Os02g04480.1 |
| KEGG | osa:4328237 dosa:Os02t0137400-01 |
| Entrez-Gene | 4328237 |