RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g04490.1 View Network Show in Genome Browser
Other Names	Os02g0137500,Os02g0137450
Description	histone acetyltransferase HAC1, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 1986422-1997362 Nucleotide Length: 4992
Protein-coding	LOC_Os02g04490

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g61920 LOC_Os01g68020 LOC_Os01g58680 LOC_Os01g08310 LOC_Os01g12530 LOC_Os01g51450 LOC_Os01g48190 LOC_Os01g70310 LOC_Os01g48170 LOC_Os01g73310 LOC_Os01g47430 More..
Downstream Genes	LOC_Os02g40810 LOC_Os03g53960 LOC_Os03g51220 LOC_Os05g46230 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 More..

miRNA Regulations
miRNAs	osa-miR156c-3p osa-miR156g-3p

Database Links
Gramene	LOC_Os02g04490.1
Rice Genome Annotation	LOC_Os02g04490.1
Ricechip	LOC_Os02g04490.1
KEGG	osa:4328238 dosa:Os02t0137500-01 dosa:Os02t0137450-00
Entrez-Gene	4328238