RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04660.1 View Network Show in Genome Browser |
| Other Names | Os02g0139200 |
| Description | arginine N-methyltransferase 5, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2087063-2093051 Nucleotide Length: 1950 |
| Protein-coding | LOC_Os02g04660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04240 LOC_Os02g01250 LOC_Os01g64640 LOC_Os01g61920 LOC_Os01g15860 LOC_Os01g40250 LOC_Os01g55870 LOC_Os01g58380 LOC_Os01g27160 LOC_Os01g27150 LOC_Os01g51450 More.. |
| Downstream Genes | LOC_Os03g54780 LOC_Os04g39444 LOC_Os02g37430 LOC_Os11g14990 LOC_Os10g08879 LOC_Os06g10620 LOC_Os08g09350 LOC_Os07g07220 LOC_Os03g14520 LOC_Os07g46440 LOC_Os03g13760 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00380 rn00624 rn01120 rn00340 rn00350 rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-4021 |
| Reference | |
|---|---|
| PubMed | 21853042 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04660.1 |
| Rice Genome Annotation | LOC_Os02g04660.1 |
| Ricechip | LOC_Os02g04660.1 |
| KEGG | osa:4328251 dosa:Os02t0139200-01 |
| Entrez-Gene | 4328251 |