RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g04700.1 View Network Show in Genome Browser |
| Other Names | Os02g0139600 |
| Description | tRNA synthetases class II domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2124896-2128770 Nucleotide Length: 1527 |
| Protein-coding | LOC_Os02g04700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37837 LOC_Os01g55540 |
| Downstream Genes | LOC_Os03g38980 LOC_Os02g53680 LOC_Os02g58220 LOC_Os03g25130 LOC_Os07g37720 LOC_Os05g05840 LOC_Os02g42230 LOC_Os07g38950 LOC_Os07g37710 LOC_Os11g39670 LOC_Os03g10190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g04700.1 |
| Rice Genome Annotation | LOC_Os02g04700.1 |
| Ricechip | LOC_Os02g04700.1 |
| KEGG | osa:4328255 dosa:Os02t0139600-01 |
| Entrez-Gene | 4328255 |