RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g05400.1 View Network Show in Genome Browser |
| Other Names | Os02g0147200 |
| Description | transmembrane protein 15, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2593933-2598356 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os02g05400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55360 LOC_Os02g05320 LOC_Os02g03460 |
| Downstream Genes | LOC_Os10g17990 LOC_Os09g18320 LOC_Os02g40870 LOC_Os06g07120 LOC_Os07g46640 LOC_Os07g16960 LOC_Os07g41680 LOC_Os07g10830 LOC_Os03g08300 LOC_Os07g10600 LOC_Os06g36890 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 |
| Metacyc Pathways | PHOSLIPSYN2-PWY PHOSLIPSYN-PWY PWY-5269 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g05400.1 |
| Rice Genome Annotation | LOC_Os02g05400.1 |
| Ricechip | LOC_Os02g05400.1 |
| KEGG | osa:9269270 dosa:Os02t0147200-01 |
| Entrez-Gene | 9269270 |