RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g05480.2 View Network Show in Genome Browser |
| Other Names | Os02g0148100 |
| Description | CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2642977-2646360 Nucleotide Length: 1113 |
| Protein-coding | LOC_Os02g05480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32660 LOC_Os01g40094 LOC_Os01g41630 LOC_Os01g10840 LOC_Os01g74000 LOC_Os01g69920 LOC_Os01g62080 LOC_Os02g04030 LOC_Os02g04020 LOC_Os01g72990 LOC_Os01g50616 More.. |
| Downstream Genes | LOC_Os04g56450 LOC_Os04g37904 LOC_Os02g05630 LOC_Os06g05520 LOC_Os06g33549 LOC_Os06g48300 LOC_Os02g15594 LOC_Os07g32380 LOC_Os06g33530 LOC_Os10g39540 LOC_Os02g55560 More.. |
| Reference | |
|---|---|
| PubMed | 21451255 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g05480.2 |
| Rice Genome Annotation | LOC_Os02g05480.2 |
| Ricechip | LOC_Os02g05480.2 |
| KEGG | osa:4328297 dosa:Os02t0148100-01 |
| Entrez-Gene | 4328297 |