RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g05620.1 View Network Show in Genome Browser |
| Other Names | Os02g0149700 |
| Description | ATEXO70G1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2735886-2738357 Nucleotide Length: 1995 |
| Protein-coding | LOC_Os02g05620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55720 |
| Downstream Genes | LOC_Os02g49770 LOC_Os04g58720 LOC_Os03g54910 LOC_Os03g46600 LOC_Os11g29190 LOC_Os12g42180 LOC_Os04g32700 LOC_Os12g37590 LOC_Os03g05720 LOC_Os10g41410 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5074 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g05620.1 |
| Rice Genome Annotation | LOC_Os02g05620.1 |
| Ricechip | LOC_Os02g05620.1 |
| KEGG | osa:4328305 dosa:Os02t0149700-01 |
| Entrez-Gene | 4328305 |