RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g05680.2 View Network Show in Genome Browser |
| Other Names | Os02g0150300 |
| Description | apoptosis-inducing factor 2, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2776407-2779386 Nucleotide Length: 927 |
| Protein-coding | LOC_Os02g05680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48960 LOC_Os01g22520 LOC_Os01g45760 LOC_Os01g53200 LOC_Os01g18320 LOC_Os01g72980 LOC_Os01g44050 LOC_Os01g59490 LOC_Os01g27050 LOC_Os01g21380 LOC_Os01g51320 More.. |
| Downstream Genes | LOC_Os10g40570 LOC_Os02g56980 LOC_Os06g22140 LOC_Os12g41590 LOC_Os02g17700 LOC_Os03g12900 LOC_Os03g06740 LOC_Os02g56850 LOC_Os03g62260 LOC_Os03g12910 LOC_Os03g05900 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1438 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g05680.2 |
| Rice Genome Annotation | LOC_Os02g05680.2 |
| Ricechip | LOC_Os02g05680.2 |
| KEGG | osa:4328310 dosa:Os02t0150300-01 |
| Entrez-Gene | 4328310 |