RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g05780.1 View Network Show in Genome Browser |
| Other Names | Os02g0151600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2842902-2847428 Nucleotide Length: 549 |
| Protein-coding | LOC_Os02g05780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32080 LOC_Os02g05770 LOC_Os02g03260 |
| Downstream Genes | LOC_Os02g39570 LOC_Os11g14950 LOC_Os06g51280 LOC_Os04g31960 LOC_Os04g32010 LOC_Os02g30630 LOC_Os12g04440 LOC_Os11g04670 LOC_Os09g20530 LOC_Os10g33980 LOC_Os08g44530 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00290 rn01100 rn01110 rn01210 rn00770 |
| Metacyc Pathways | ILEUSYN-PWY PWY-5101 PWY-5103 PWY-5104 VALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g05780.1 |
| Rice Genome Annotation | LOC_Os02g05780.1 |
| Ricechip | LOC_Os02g05780.1 |
| KEGG | dosa:Os02t0151600-00 |